Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.75□□□□□ -1.33
ClpbQ60649 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.75□□□□□ -1.33
ClpbQ60649 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ClpbQ60649 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm16020-201ENSMUST00000084281 210 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ClpbQ60649 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ClpbQ60649 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ClpbQ60649 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.75□□□□□ -1.33
ClpbQ60649 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Mir290a-201ENSMUST00000104627 83 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm14631-201ENSMUST00000119067 594 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm23762-201ENSMUST00000158348 106 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Mir6357-201ENSMUST00000184246 104 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm5147-201ENSMUST00000185999 794 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm38373-201ENSMUST00000192042 288 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm37901-201ENSMUST00000195107 514 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm43905-201ENSMUST00000204516 204 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm6681-201ENSMUST00000205215 607 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm45100-201ENSMUST00000209153 391 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm7986-201ENSMUST00000221336 551 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ClpbQ60649 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
ClpbQ60649 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ClpbQ60649 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
ClpbQ60649 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.74□□□□□ -1.33
ClpbQ60649 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.73□□□□□ -1.33
ClpbQ60649 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.73□□□□□ -1.33
ClpbQ60649 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.73□□□□□ -1.33
ClpbQ60649 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.73□□□□□ -1.33
ClpbQ60649 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.73□□□□□ -1.33
ClpbQ60649 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ClpbQ60649 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms