Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm17048-201ENSMUST00000179266 847 ntBASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Gm27299-201ENSMUST00000184593 103 ntBASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 AC151984.1-201ENSMUST00000218261 2976 ntBASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 A1cf-203ENSMUST00000224400 1204 ntBASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sf3b2Q3UJB0 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm43128-201ENSMUST00000202212 1621 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm8424-201ENSMUST00000117716 988 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm15366-201ENSMUST00000118433 1019 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm25244-201ENSMUST00000178089 132 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm27005-201ENSMUST00000182783 921 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Mir6403-201ENSMUST00000185007 129 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 AC161374.1-201ENSMUST00000224191 794 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm24621-201ENSMUST00000082679 140 ntBASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sf3b2Q3UJB0 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Mir697-201ENSMUST00000102316 109 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm24176-201ENSMUST00000158928 121 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm16027-201ENSMUST00000161618 758 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm27460-201ENSMUST00000184213 100 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm43576-201ENSMUST00000197937 871 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm7769-201ENSMUST00000212900 933 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm22126-201ENSMUST00000083244 142 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Gm21781-201ENSMUST00000178920 4838 ntBASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC9.19□□□□□ -0.94
Sf3b2Q3UJB0 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sf3b2Q3UJB0 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms