Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm14871-201ENSMUST00000119056 194 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm14335-201ENSMUST00000119165 810 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm14613-201ENSMUST00000122239 752 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC4.56□□□□□ -1.68
PrkdcP97313 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC4.56□□□□□ -1.68
PrkdcP97313 Mir7031-201ENSMUST00000183860 65 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Mir219c-201ENSMUST00000199860 60 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm43105-201ENSMUST00000202987 459 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
PrkdcP97313 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
PrkdcP97313 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm42577-201ENSMUST00000201367 3211 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PrkdcP97313 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Tmem161b-206ENSMUST00000225069 2414 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm13579-201ENSMUST00000118519 517 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm37784-201ENSMUST00000193233 189 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PrkdcP97313 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm44916-201ENSMUST00000208664 2194 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 AC138284.1-201ENSMUST00000214258 3236 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PrkdcP97313 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm14352-201ENSMUST00000119250 449 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm13007-201ENSMUST00000121866 365 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm24216-201ENSMUST00000158259 117 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm25942-201ENSMUST00000180080 110 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm3605-201ENSMUST00000185858 440 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PrkdcP97313 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm44251-201ENSMUST00000204963 442 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 CT009711.4-201ENSMUST00000225685 198 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
PrkdcP97313 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm43062-201ENSMUST00000196302 1319 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm16487-201ENSMUST00000105048 4037 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
PrkdcP97313 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm16248-201ENSMUST00000124238 243 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.55□□□□□ -1.68
PrkdcP97313 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PrkdcP97313 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.55□□□□□ -1.68
PrkdcP97313 Gm44823-201ENSMUST00000204775 1107 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 AC138765.3-201ENSMUST00000227981 423 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.55□□□□□ -1.68
PrkdcP97313 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC4.55□□□□□ -1.68
PrkdcP97313 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms