Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Ufd1P70362 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Mbnl2-203ENSMUST00000226800 3328 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Mir708-201ENSMUST00000102189 109 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm13254-201ENSMUST00000118295 654 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm9516-201ENSMUST00000119684 424 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm15836-201ENSMUST00000119952 793 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm14787-201ENSMUST00000121236 388 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 n-R5s76-201ENSMUST00000122700 113 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm17828-201ENSMUST00000183380 799 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ufd1P70362 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm28164-201ENSMUST00000190143 442 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm42779-201ENSMUST00000198807 406 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm44213-201ENSMUST00000204977 703 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm18860-201ENSMUST00000212029 764 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC5.85□□□□□ -1.47
Ufd1P70362 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ufd1P70362 AC120002.1-201ENSMUST00000218456 331 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 AC132384.1-201ENSMUST00000219908 1195 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm18618-201ENSMUST00000222211 473 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm5321-201ENSMUST00000072050 447 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ufd1P70362 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ufd1P70362 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ufd1P70362 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Ufd1P70362 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Ufd1P70362 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.85□□□□□ -1.47
Ufd1P70362 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.85□□□□□ -1.47
Ufd1P70362 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Ufd1P70362 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Ufd1P70362 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ufd1P70362 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
Ufd1P70362 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ufd1P70362 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Ufd1P70362 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC5.84□□□□□ -1.47
Ufd1P70362 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm7785-201ENSMUST00000117121 892 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm12365-201ENSMUST00000117931 568 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm12445-201ENSMUST00000117947 885 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ufd1P70362 Gm6884-201ENSMUST00000119318 615 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm11928-201ENSMUST00000119323 437 ntBASIC5.84□□□□□ -1.47
Ufd1P70362 Gm14716-201ENSMUST00000120138 718 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms