Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12189-201ENSMUST00000119779 912 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm11387-201ENSMUST00000120266 772 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Rfx1P48377 Gm15534-201ENSMUST00000137642 562 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm24002-201ENSMUST00000158456 104 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Gm6838-201ENSMUST00000172851 582 ntBASIC8.79□□□□□ -1
Rfx1P48377 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC8.79□□□□□ -1
Rfx1P48377 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.79□□□□□ -1
Rfx1P48377 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm28586-201ENSMUST00000189857 456 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.79□□□□□ -1
Rfx1P48377 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm4374-201ENSMUST00000204929 424 ntBASIC8.79□□□□□ -1
Rfx1P48377 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm45008-201ENSMUST00000206420 493 ntBASIC8.79□□□□□ -1
Rfx1P48377 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.79□□□□□ -1
Rfx1P48377 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.79□□□□□ -1
Rfx1P48377 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rfx1P48377 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Rfx1P48377 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 AC164297.4-201ENSMUST00000224225 1307 ntBASIC8.79□□□□□ -1
Rfx1P48377 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.79□□□□□ -1
Rfx1P48377 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.78□□□□□ -1
Rfx1P48377 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gm25232-201ENSMUST00000104502 132 ntBASIC8.78□□□□□ -1
Rfx1P48377 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gm2199-201ENSMUST00000119065 874 ntBASIC8.78□□□□□ -1
Rfx1P48377 Mup-ps13-201ENSMUST00000120662 545 ntBASIC8.78□□□□□ -1
Rfx1P48377 Mup-ps1-201ENSMUST00000120720 544 ntBASIC8.78□□□□□ -1
Rfx1P48377 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gm22342-201ENSMUST00000122647 298 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC8.78□□□□□ -1
Rfx1P48377 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.78□□□□□ -1
Rfx1P48377 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gm22693-201ENSMUST00000175049 442 ntBASIC8.78□□□□□ -1
Rfx1P48377 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC8.78□□□□□ -1
Rfx1P48377 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Rfx1P48377 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC8.78□□□□□ -1
Rfx1P48377 Gm7734-201ENSMUST00000182832 1011 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm28871-201ENSMUST00000186191 687 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm37463-201ENSMUST00000193819 796 ntBASIC8.78□□□□□ -1
Rfx1P48377 Ighv10-2-201ENSMUST00000195182 298 ntBASIC8.78□□□□□ -1
Rfx1P48377 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC8.78□□□□□ -1
Rfx1P48377 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
Rfx1P48377 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.78□□□□□ -1
Rfx1P48377 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.78□□□□□ -1
Rfx1P48377 Gm18585-201ENSMUST00000215197 556 ntBASIC8.78□□□□□ -1
Rfx1P48377 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm4796-201ENSMUST00000219802 624 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.78□□□□□ -1
Rfx1P48377 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.78□□□□□ -1
Rfx1P48377 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 Gm18629-201ENSMUST00000222496 884 ntBASIC8.78□□□□□ -1
Rfx1P48377 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC8.78□□□□□ -1
Rfx1P48377 AC123867.1-201ENSMUST00000224990 816 ntBASIC8.78□□□□□ -1
Rfx1P48377 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.78□□□□□ -1
Rfx1P48377 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.78□□□□□ -1
Rfx1P48377 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rfx1P48377 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rfx1P48377 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms