Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.05□□□□□ -1.28
HttP42859 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.05□□□□□ -1.28
HttP42859 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.05□□□□□ -1.28
HttP42859 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.05□□□□□ -1.28
HttP42859 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.05□□□□□ -1.28
HttP42859 Gm20691-201ENSMUST00000176889 333 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm19786-201ENSMUST00000222589 580 ntBASIC7.05□□□□□ -1.28
HttP42859 Mir188-201ENSMUST00000083464 68 ntBASIC7.05□□□□□ -1.28
HttP42859 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HttP42859 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
HttP42859 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.05□□□□□ -1.28
HttP42859 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Gm8728-201ENSMUST00000207367 2178 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm8486-201ENSMUST00000207508 2171 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm8685-201ENSMUST00000207567 2183 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm16443-201ENSMUST00000207909 2184 ntBASIC7.05□□□□□ -1.28
HttP42859 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.05□□□□□ -1.28
HttP42859 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.05□□□□□ -1.28
HttP42859 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm16248-201ENSMUST00000124238 243 ntBASIC7.05□□□□□ -1.28
HttP42859 Gm26372-201ENSMUST00000157831 236 ntBASIC7.05□□□□□ -1.28
HttP42859 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
HttP42859 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC7.05□□□□□ -1.28
HttP42859 AC164315.1-201ENSMUST00000226452 708 ntBASIC7.05□□□□□ -1.28
HttP42859 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HttP42859 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HttP42859 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.05□□□□□ -1.28
HttP42859 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
HttP42859 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
HttP42859 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC7.04□□□□□ -1.28
HttP42859 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7.04□□□□□ -1.28
HttP42859 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC7.04□□□□□ -1.28
HttP42859 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC7.04□□□□□ -1.28
HttP42859 Gm18007-201ENSMUST00000205019 844 ntBASIC7.04□□□□□ -1.28
HttP42859 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HttP42859 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.04□□□□□ -1.28
HttP42859 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HttP42859 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.04□□□□□ -1.28
HttP42859 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Gm25722-201ENSMUST00000157498 279 ntBASIC7.04□□□□□ -1.28
HttP42859 Gm26312-201ENSMUST00000157769 165 ntBASIC7.04□□□□□ -1.28
HttP42859 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.04□□□□□ -1.28
HttP42859 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.04□□□□□ -1.28
HttP42859 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
HttP42859 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HttP42859 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm25178-201ENSMUST00000122633 325 ntBASIC7.03□□□□□ -1.28
HttP42859 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.03□□□□□ -1.28
HttP42859 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm8869-201ENSMUST00000195222 947 ntBASIC7.03□□□□□ -1.28
HttP42859 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm11197-201ENSMUST00000145158 839 ntBASIC7.03□□□□□ -1.28
HttP42859 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.03□□□□□ -1.28
HttP42859 Gm43105-201ENSMUST00000202987 459 ntBASIC7.03□□□□□ -1.28
HttP42859 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.03□□□□□ -1.28
HttP42859 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HttP42859 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HttP42859 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.03□□□□□ -1.28
HttP42859 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HttP42859 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.03□□□□□ -1.28
HttP42859 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms