Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Cxcl12P40224 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Cxcl12P40224 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm26067-201ENSMUST00000103789 110 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm24473-201ENSMUST00000104483 131 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Mup-ps16-201ENSMUST00000120085 596 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm12402-201ENSMUST00000120536 334 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm11343-201ENSMUST00000120579 599 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm21392-201ENSMUST00000182950 972 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm27849-201ENSMUST00000183673 125 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Mir7211-201ENSMUST00000184071 63 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm35323-201ENSMUST00000191836 499 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm43501-201ENSMUST00000202513 107 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
Cxcl12P40224 Ephx2-202ENSMUST00000224698 1985 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Cxcl12P40224 Gm43311-201ENSMUST00000200016 2377 ntBASIC7.22□□□□□ -1.25
Cxcl12P40224 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.21□□□□□ -1.25
Cxcl12P40224 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.21□□□□□ -1.25
Cxcl12P40224 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Cxcl12P40224 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Cxcl12P40224 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Cxcl12P40224 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Cxcl12P40224 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm12242-201ENSMUST00000118824 738 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm12135-201ENSMUST00000119170 466 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm6977-201ENSMUST00000121568 512 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm13237-201ENSMUST00000122151 635 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm8648-201ENSMUST00000122457 221 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm22024-201ENSMUST00000122733 287 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm27960-201ENSMUST00000183445 184 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.21□□□□□ -1.26
Cxcl12P40224 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.21□□□□□ -1.26
Cxcl12P40224 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.21□□□□□ -1.26
Cxcl12P40224 AC162934.2-201ENSMUST00000221451 249 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC7.21□□□□□ -1.26
Cxcl12P40224 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.21□□□□□ -1.26
Cxcl12P40224 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms