Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.83□□□□□ -1.16
Col2a1P28481 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col2a1P28481 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.83□□□□□ -1.16
Col2a1P28481 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm26079-201ENSMUST00000104066 133 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm8250-201ENSMUST00000117398 774 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm5319-201ENSMUST00000118965 873 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm12451-201ENSMUST00000121636 633 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.82□□□□□ -1.16
Col2a1P28481 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm25904-201ENSMUST00000158491 143 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm4152-201ENSMUST00000172675 259 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm25675-201ENSMUST00000174979 118 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.82□□□□□ -1.16
Col2a1P28481 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col2a1P28481 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.82□□□□□ -1.16
Col2a1P28481 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.82□□□□□ -1.16
Col2a1P28481 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col2a1P28481 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm16016-201ENSMUST00000120831 550 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm6061-201ENSMUST00000175860 492 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.81□□□□□ -1.16
Col2a1P28481 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm5324-201ENSMUST00000208115 476 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.81□□□□□ -1.16
Col2a1P28481 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
Col2a1P28481 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC7.81□□□□□ -1.16
Col2a1P28481 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col2a1P28481 Gm13081-201ENSMUST00000121527 5599 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms