Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Sdc1P18828 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm22934-201ENSMUST00000103961 132 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm8534-201ENSMUST00000118553 766 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm8084-201ENSMUST00000120807 752 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm5389-201ENSMUST00000120893 1176 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm13674-201ENSMUST00000121276 823 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC5.54□□□□□ -1.52
Sdc1P18828 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm44159-201ENSMUST00000204065 442 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm44705-201ENSMUST00000206719 339 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 AC165260.5-201ENSMUST00000224640 1247 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm2108-201ENSMUST00000165058 2177 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
Sdc1P18828 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.54□□□□□ -1.52
Sdc1P18828 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sdc1P18828 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sdc1P18828 Gm6823-201ENSMUST00000120791 1839 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Mir760-201ENSMUST00000103257 119 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm8818-201ENSMUST00000110797 1047 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm11928-201ENSMUST00000119323 437 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm5387-201ENSMUST00000119776 857 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm11689-201ENSMUST00000120766 302 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm14332-201ENSMUST00000121982 899 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm2735-201ENSMUST00000136133 277 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm22484-201ENSMUST00000157992 306 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm4956-202ENSMUST00000178869 672 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm7734-201ENSMUST00000182832 1011 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm18970-201ENSMUST00000186040 938 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC5.53□□□□□ -1.52
Sdc1P18828 Gm44225-201ENSMUST00000203582 186 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.53□□□□□ -1.52
Sdc1P18828 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.53□□□□□ -1.52
Sdc1P18828 Gm45446-201ENSMUST00000209348 216 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms