Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Lire1P11260 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Lire1P11260 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.88□□□□□ -1.31
Lire1P11260 Gm44509-201ENSMUST00000205400 1324 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Mir503-201ENSMUST00000102168 71 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm14201-201ENSMUST00000117627 289 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm15209-201ENSMUST00000117703 400 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm11926-201ENSMUST00000118520 430 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm11922-201ENSMUST00000118967 475 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm12601-201ENSMUST00000118994 846 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm12692-201ENSMUST00000121092 546 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm9697-201ENSMUST00000147052 997 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.88□□□□□ -1.31
Lire1P11260 Gm22035-201ENSMUST00000157284 228 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm24300-201ENSMUST00000177809 109 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm5283-201ENSMUST00000177874 334 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm24017-201ENSMUST00000178726 109 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm23952-201ENSMUST00000179380 109 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm43390-201ENSMUST00000196614 421 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm42804-201ENSMUST00000199701 178 ntBASIC6.88□□□□□ -1.31
Lire1P11260 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.88□□□□□ -1.31
Lire1P11260 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC6.88□□□□□ -1.31
Lire1P11260 Gm7239-201ENSMUST00000220981 860 ntBASIC6.88□□□□□ -1.31
Lire1P11260 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.88□□□□□ -1.31
Lire1P11260 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.88□□□□□ -1.31
Lire1P11260 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.88□□□□□ -1.31
Lire1P11260 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Lire1P11260 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Gm24696-201ENSMUST00000083878 134 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.88□□□□□ -1.31
Lire1P11260 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.88□□□□□ -1.31
Lire1P11260 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Lire1P11260 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.88□□□□□ -1.31
Lire1P11260 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Lire1P11260 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Lire1P11260 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Lire1P11260 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.87□□□□□ -1.31
Lire1P11260 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Lire1P11260 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm13311-201ENSMUST00000117863 379 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm13921-201ENSMUST00000119411 463 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm13626-201ENSMUST00000119435 402 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm11955-201ENSMUST00000119801 470 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm12993-201ENSMUST00000119900 479 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Gm13586-201ENSMUST00000121784 464 ntBASIC6.87□□□□□ -1.31
Lire1P11260 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm371-201ENSMUST00000142240 1245 ntBASIC6.87□□□□□ -1.31
Lire1P11260 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Lire1P11260 Gm6100-201ENSMUST00000180253 403 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms