Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Mir697-201ENSMUST00000102316 109 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm25498-201ENSMUST00000104424 129 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm6382-201ENSMUST00000118873 942 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm24286-201ENSMUST00000157632 128 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Mir1930-201ENSMUST00000158799 84 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm2976-201ENSMUST00000160362 513 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm17212-201ENSMUST00000166666 259 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm26587-201ENSMUST00000180795 989 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm27782-201ENSMUST00000185059 199 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm28580-201ENSMUST00000186767 88 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm30517-201ENSMUST00000197350 772 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm18907-201ENSMUST00000209719 932 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm8275-201ENSMUST00000219732 424 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm23734-201ENSMUST00000083753 109 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Chmp6P0C0A3 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.52□□□□□ -1.21
Chmp6P0C0A3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm22774-201ENSMUST00000102084 109 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm25396-201ENSMUST00000103981 133 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm24869-201ENSMUST00000104072 128 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm25379-201ENSMUST00000104338 114 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm12740-201ENSMUST00000118794 308 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm12535-201ENSMUST00000121025 484 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm13221-201ENSMUST00000121712 430 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm21182-201ENSMUST00000178899 794 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Mir8120-201ENSMUST00000185035 139 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm7412-201ENSMUST00000191692 605 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm37349-201ENSMUST00000194205 624 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm22711-202ENSMUST00000197029 135 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm3511-201ENSMUST00000199823 204 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm44565-201ENSMUST00000208194 269 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm9652-201ENSMUST00000209345 163 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm45725-201ENSMUST00000212962 337 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm24451-201ENSMUST00000083353 133 ntBASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Chmp6P0C0A3 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Chmp6P0C0A3 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms