Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Hoxa9P09631 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm2178-201ENSMUST00000104927 357 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm16073-201ENSMUST00000116032 517 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm12710-201ENSMUST00000119011 216 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm8312-201ENSMUST00000119380 618 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm5166-201ENSMUST00000121332 573 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm22024-201ENSMUST00000122733 287 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 BC064078-201ENSMUST00000122939 570 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm43772-201ENSMUST00000202052 379 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm7351-201ENSMUST00000210745 580 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm24924-201ENSMUST00000084007 164 ntBASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.09□□□□□ -1.27
Hoxa9P09631 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Hoxa9P09631 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.09□□□□□ -1.28
Hoxa9P09631 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Hoxa9P09631 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Hoxa9P09631 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm22256-201ENSMUST00000102291 107 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm25724-201ENSMUST00000104531 117 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm13141-201ENSMUST00000117417 456 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.08□□□□□ -1.28
Hoxa9P09631 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm5711-201ENSMUST00000197896 421 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm3511-201ENSMUST00000199823 204 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm44943-201ENSMUST00000207254 300 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm45279-201ENSMUST00000210315 391 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm36758-201ENSMUST00000222594 310 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 AC133203.1-201ENSMUST00000228241 301 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Mir106b-201ENSMUST00000083580 82 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm22865-201ENSMUST00000083949 214 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.08□□□□□ -1.28
Hoxa9P09631 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Hoxa9P09631 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Hoxa9P09631 Pramel-201ENSMUST00000118979 1383 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms