Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col4a1P02463 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm24173-201ENSMUST00000104130 128 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm8692-201ENSMUST00000118102 438 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm12229-201ENSMUST00000120487 468 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm14038-201ENSMUST00000121500 807 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm25904-201ENSMUST00000158491 143 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC8.33□□□□□ -1.08
Col4a1P02463 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm19185-201ENSMUST00000196365 643 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm44571-201ENSMUST00000208092 533 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.33□□□□□ -1.08
Col4a1P02463 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC8.33□□□□□ -1.08
Col4a1P02463 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col4a1P02463 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col4a1P02463 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Peg13-201ENSMUST00000202826 4725 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm37648-201ENSMUST00000192072 2563 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm14746-201ENSMUST00000120309 741 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm26037-201ENSMUST00000158150 311 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm23259-201ENSMUST00000158318 303 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm21542-201ENSMUST00000182307 993 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Col4a1P02463 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm18752-201ENSMUST00000192876 608 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Gm38237-201ENSMUST00000193366 376 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 n-R5s58-201ENSMUST00000093682 119 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col4a1P02463 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.32□□□□□ -1.08
Col4a1P02463 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.32□□□□□ -1.08
Col4a1P02463 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col4a1P02463 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.31□□□□□ -1.08
Col4a1P02463 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm27853-201ENSMUST00000184176 250 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm27507-201ENSMUST00000184199 93 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.31□□□□□ -1.08
Col4a1P02463 Gm3841-201ENSMUST00000191399 451 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm37493-201ENSMUST00000193167 433 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col4a1P02463 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm42799-201ENSMUST00000201331 328 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Gm44265-201ENSMUST00000203631 465 ntBASIC8.31□□□□□ -1.08
Col4a1P02463 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms