Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm37017-201ENSMUST00000195266 747 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm8539-201ENSMUST00000199822 501 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm43725-201ENSMUST00000200122 369 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm45100-201ENSMUST00000209153 391 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm17611-202ENSMUST00000220613 814 ntBASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim3Q9R1R2 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
Trim3Q9R1R2 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Trim3Q9R1R2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim3Q9R1R2 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim3Q9R1R2 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm25593-201ENSMUST00000102272 96 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm15081-201ENSMUST00000119794 844 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm12321-201ENSMUST00000121485 804 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm14990-201ENSMUST00000122354 445 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm22024-201ENSMUST00000122733 287 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm10913-201ENSMUST00000133732 463 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm7420-201ENSMUST00000162836 842 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm7651-201ENSMUST00000173398 901 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm22702-201ENSMUST00000175372 69 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm26587-201ENSMUST00000180795 989 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm27684-201ENSMUST00000183778 80 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm29369-201ENSMUST00000190674 615 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm37322-201ENSMUST00000193409 337 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm43212-201ENSMUST00000198208 394 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm20136-201ENSMUST00000207501 891 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim3Q9R1R2 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm23437-201ENSMUST00000104036 127 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm12944-201ENSMUST00000119262 463 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm15538-201ENSMUST00000121410 313 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm12754-201ENSMUST00000121908 454 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm23657-201ENSMUST00000122623 294 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm25178-201ENSMUST00000122633 325 ntBASIC6.57□□□□□ -1.36
Trim3Q9R1R2 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms