Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm36928-201ENSMUST00000192466 694 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm37173-201ENSMUST00000194498 1017 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm37325-201ENSMUST00000194971 694 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm37017-201ENSMUST00000195266 747 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm38079-201ENSMUST00000195603 154 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm20239-201ENSMUST00000196610 982 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm43905-201ENSMUST00000204516 204 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm43922-201ENSMUST00000205071 328 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm6581-201ENSMUST00000214545 260 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm22504-201ENSMUST00000082963 139 ntBASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ddx56Q9D0R4 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.59□□□□□ -1.2
Ddx56Q9D0R4 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.59□□□□□ -1.2
Ddx56Q9D0R4 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.59□□□□□ -1.2
Ddx56Q9D0R4 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
Ddx56Q9D0R4 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.2
Ddx56Q9D0R4 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm15203-201ENSMUST00000117668 455 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm14788-201ENSMUST00000119457 375 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm11866-201ENSMUST00000120209 335 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm13940-201ENSMUST00000121023 301 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm12754-201ENSMUST00000121908 454 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm21182-201ENSMUST00000178899 794 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm7426-201ENSMUST00000179046 404 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm21430-201ENSMUST00000182998 998 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm28573-201ENSMUST00000187821 380 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm18699-201ENSMUST00000190713 243 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm28400-201ENSMUST00000191332 380 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm38022-201ENSMUST00000191762 403 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm42646-201ENSMUST00000202233 914 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm43812-202ENSMUST00000202701 581 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm44003-201ENSMUST00000203024 490 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm18043-201ENSMUST00000216741 739 ntBASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ddx56Q9D0R4 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm22470-201ENSMUST00000104117 130 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm15778-201ENSMUST00000118469 608 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm14836-201ENSMUST00000118567 471 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm26371-201ENSMUST00000157829 104 ntBASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ddx56Q9D0R4 Gm20430-201ENSMUST00000172474 207 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms