Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm26416-201ENSMUST00000104280 134 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm13798-201ENSMUST00000118285 139 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm13900-201ENSMUST00000119402 498 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm22025-201ENSMUST00000122734 302 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm26570-201ENSMUST00000180672 342 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm36935-201ENSMUST00000192526 292 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm44833-201ENSMUST00000208368 331 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm2221-201ENSMUST00000209342 418 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc47Q9D024 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm22774-201ENSMUST00000102084 109 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm13221-201ENSMUST00000121712 430 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm11263-201ENSMUST00000121853 749 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 BC064078-201ENSMUST00000122939 570 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm7412-201ENSMUST00000191692 605 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Ighv1-17-201ENSMUST00000194435 350 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm23734-201ENSMUST00000083753 109 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Gm25189-201ENSMUST00000083911 164 ntBASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc47Q9D024 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Ccdc47Q9D024 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Ccdc47Q9D024 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Ccdc47Q9D024 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm25969-201ENSMUST00000157166 132 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm24286-201ENSMUST00000157632 128 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm26183-201ENSMUST00000157685 139 ntBASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc47Q9D024 Gm23164-201ENSMUST00000175084 111 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms