Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Pus3-201ENSMUST00000034615 2019 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm37354-201ENSMUST00000193333 2384 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm45768-201ENSMUST00000206763 3202 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s102-201ENSMUST00000101990 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm25613-201ENSMUST00000104012 129 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Vegfa-203ENSMUST00000113519 513 ntTSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Mir467h-201ENSMUST00000116759 121 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Mir467f-201ENSMUST00000116923 120 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm14163-201ENSMUST00000117342 217 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm13260-201ENSMUST00000117797 1264 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm13087-201ENSMUST00000118298 256 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm14016-201ENSMUST00000119095 486 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm12917-201ENSMUST00000119850 639 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm5388-201ENSMUST00000120059 1117 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm14725-201ENSMUST00000120324 828 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm14876-201ENSMUST00000120795 327 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm14156-201ENSMUST00000121538 483 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm15335-201ENSMUST00000122442 411 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 4933407L21Rik-202ENSMUST00000129392 503 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm22014-201ENSMUST00000158785 290 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm7316-201ENSMUST00000165395 445 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Sorbs1-204ENSMUST00000165469 2145 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm17137-202ENSMUST00000165729 957 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s101-201ENSMUST00000177910 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s114-201ENSMUST00000178297 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s119-201ENSMUST00000178861 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s127-201ENSMUST00000179185 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s129-201ENSMUST00000180122 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 n-R5s131-201ENSMUST00000180280 119 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm6113-201ENSMUST00000180319 639 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm29550-201ENSMUST00000185543 285 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm29175-201ENSMUST00000189500 402 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 2610105M22Rik-201ENSMUST00000193707 1153 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm42437-201ENSMUST00000197263 923 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm42628-201ENSMUST00000198498 764 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Igkv9-119-201ENSMUST00000200307 353 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm45227-201ENSMUST00000205585 169 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm44565-201ENSMUST00000208194 269 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm4972-201ENSMUST00000211108 1254 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm8838-201ENSMUST00000212978 541 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 CT485606.2-201ENSMUST00000216728 401 ntTSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm18114-201ENSMUST00000221780 523 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 CT009509.1-201ENSMUST00000223855 466 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 AC154642.1-201ENSMUST00000224173 740 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1382-201ENSMUST00000074543 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1371-201ENSMUST00000075844 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm9234-201ENSMUST00000077747 492 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Gm6990-201ENSMUST00000086830 348 ntBASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sec61bQ9CQS8 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms