Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm25178-201ENSMUST00000122633 325 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm11962-201ENSMUST00000145746 255 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm3208-201ENSMUST00000168281 427 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm19791-201ENSMUST00000180398 859 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Mir7084-201ENSMUST00000183876 70 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm29161-201ENSMUST00000188250 699 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm18875-201ENSMUST00000188563 882 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm28070-201ENSMUST00000191502 445 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm37017-201ENSMUST00000195266 747 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm44722-201ENSMUST00000206473 436 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm45497-201ENSMUST00000211701 740 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm24411-201ENSMUST00000083428 131 ntBASIC6.84□□□□□ -1.31
Msh4Q99MT2 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msh4Q99MT2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Msh4Q99MT2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Msh4Q99MT2 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.84□□□□□ -1.32
Msh4Q99MT2 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Msh4Q99MT2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Msh4Q99MT2 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm13006-201ENSMUST00000118683 214 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm13486-201ENSMUST00000119910 282 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm12321-201ENSMUST00000121485 804 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm5272-201ENSMUST00000182730 982 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm27782-201ENSMUST00000185059 199 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm8282-201ENSMUST00000187559 483 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm37689-201ENSMUST00000193139 275 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm37322-201ENSMUST00000193409 337 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm36932-201ENSMUST00000195226 929 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm43147-201ENSMUST00000196944 542 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm45100-201ENSMUST00000209153 391 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm46311-201ENSMUST00000217971 203 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 AC110816.1-201ENSMUST00000218559 980 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 AC158388.1-201ENSMUST00000225441 256 ntBASIC6.83□□□□□ -1.32
Msh4Q99MT2 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Msh4Q99MT2 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms