Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm28420-201ENSMUST00000187340 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28106-201ENSMUST00000187640 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28698-201ENSMUST00000187734 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29224-201ENSMUST00000187965 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29189-201ENSMUST00000188018 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29476-201ENSMUST00000188397 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29505-201ENSMUST00000188424 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28125-201ENSMUST00000188470 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29391-201ENSMUST00000188545 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29280-201ENSMUST00000188571 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28349-201ENSMUST00000188590 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29652-201ENSMUST00000188622 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28819-206ENSMUST00000188816 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29079-201ENSMUST00000188875 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28213-201ENSMUST00000189183 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29382-201ENSMUST00000189549 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29377-205ENSMUST00000189603 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28327-201ENSMUST00000189638 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28790-201ENSMUST00000189642 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28907-201ENSMUST00000189700 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29586-207ENSMUST00000189745 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29115-201ENSMUST00000189870 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28366-201ENSMUST00000190147 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29212-201ENSMUST00000190384 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29533-201ENSMUST00000190403 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28162-201ENSMUST00000190545 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm18699-201ENSMUST00000190713 243 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29030-201ENSMUST00000190848 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28742-201ENSMUST00000191001 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28899-201ENSMUST00000191161 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29567-201ENSMUST00000191188 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28222-201ENSMUST00000191210 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28776-201ENSMUST00000191282 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29306-201ENSMUST00000191366 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29618-201ENSMUST00000191423 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm19087-201ENSMUST00000191430 946 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28136-210ENSMUST00000191432 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm29251-201ENSMUST00000191480 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28658-201ENSMUST00000191532 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm32180-201ENSMUST00000192415 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm30598-201ENSMUST00000192620 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm37177-201ENSMUST00000193768 417 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm37627-201ENSMUST00000194585 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm34274-201ENSMUST00000195825 615 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm9240-201ENSMUST00000206527 742 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.19□□□□□ -1.42
Scrt1Q99M85 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scrt1Q99M85 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm12244-201ENSMUST00000119500 291 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm24545-201ENSMUST00000158651 85 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm3760-201ENSMUST00000167475 804 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm24824-201ENSMUST00000175097 78 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm23187-201ENSMUST00000175746 86 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm23450-201ENSMUST00000178285 91 ntBASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Scrt1Q99M85 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms