Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm35323-201ENSMUST00000191836 499 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm17950-201ENSMUST00000214617 646 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Gm4042-201ENSMUST00000216946 637 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.34□□□□□ -1.07
Atg4aQ8C9S8 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Atg4aQ8C9S8 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Atg4aQ8C9S8 AC159624.1-201ENSMUST00000217762 1344 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm15310-201ENSMUST00000117891 372 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm14550-201ENSMUST00000117918 407 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm14158-201ENSMUST00000118409 308 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm29383-201ENSMUST00000188284 480 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm2531-201ENSMUST00000075609 512 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Atg4aQ8C9S8 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm14613-201ENSMUST00000122239 752 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm28665-201ENSMUST00000189269 670 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm29141-201ENSMUST00000190357 882 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm37526-201ENSMUST00000194640 619 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm6077-201ENSMUST00000196008 499 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm36448-201ENSMUST00000199916 438 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Mir296-201ENSMUST00000083587 79 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.32□□□□□ -1.08
Atg4aQ8C9S8 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm13141-201ENSMUST00000117417 456 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.31□□□□□ -1.08
Atg4aQ8C9S8 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms