Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Col6a6Q8C6K9 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm12959-201ENSMUST00000119396 403 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm14070-201ENSMUST00000120773 428 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm15750-201ENSMUST00000120970 616 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Mir7037-201ENSMUST00000184414 65 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm42723-201ENSMUST00000199966 1044 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Mir466j-201ENSMUST00000116876 122 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm13462-201ENSMUST00000121472 961 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm11879-201ENSMUST00000121885 702 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm25219-201ENSMUST00000157545 330 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Mir3078-201ENSMUST00000175231 87 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm7426-201ENSMUST00000179046 404 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.28□□□□□ -1.4
Col6a6Q8C6K9 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm44745-201ENSMUST00000206563 2723 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm23311-201ENSMUST00000104152 134 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm15216-201ENSMUST00000118058 277 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm8812-201ENSMUST00000118496 412 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm5125-201ENSMUST00000148614 624 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm26323-201ENSMUST00000157743 175 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm23896-201ENSMUST00000158109 130 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm37135-201ENSMUST00000192652 534 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm33312-201ENSMUST00000222443 332 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm6990-201ENSMUST00000086830 348 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a6Q8C6K9 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms