Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24519-201ENSMUST00000104507 132 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm14158-201ENSMUST00000118409 308 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm23031-201ENSMUST00000157998 119 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm16113-201ENSMUST00000159629 372 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm7418-201ENSMUST00000162120 801 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm6061-201ENSMUST00000175860 492 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm3841-201ENSMUST00000191399 451 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm44705-201ENSMUST00000206719 339 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm3678-201ENSMUST00000218888 492 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.08□□□□□ -1.28
Trub1Q8C0D0 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trub1Q8C0D0 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm14865-201ENSMUST00000117523 494 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm15586-201ENSMUST00000121218 528 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Mir1981-201ENSMUST00000157934 82 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm27001-201ENSMUST00000182252 936 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm27617-201ENSMUST00000184321 168 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Mir6972-201ENSMUST00000184774 64 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm28801-201ENSMUST00000188761 449 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm4525-201ENSMUST00000198831 254 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm2975-201ENSMUST00000209710 820 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm18907-201ENSMUST00000209719 932 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Malat1-201ENSMUST00000172812 6983 ntBASIC7.07□□□□□ -1.28
Trub1Q8C0D0 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trub1Q8C0D0 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms