Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm6451-201ENSMUST00000121488 717 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm45279-201ENSMUST00000210315 391 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm7439-201ENSMUST00000214053 835 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Mir296-201ENSMUST00000083587 79 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sh3rf2Q8BZT2 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm14865-201ENSMUST00000117523 494 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm12175-201ENSMUST00000122081 345 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm12929-201ENSMUST00000122406 370 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm25178-201ENSMUST00000122633 325 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm12504-202ENSMUST00000148026 306 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm16102-201ENSMUST00000160955 420 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm4956-202ENSMUST00000178869 672 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm6931-201ENSMUST00000183103 371 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm10136-201ENSMUST00000183196 435 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm28439-201ENSMUST00000187714 876 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm29011-201ENSMUST00000191059 712 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm36965-201ENSMUST00000193797 394 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm44411-201ENSMUST00000204172 349 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm4042-201ENSMUST00000216946 637 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Sh3rf2Q8BZT2 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sh3rf2Q8BZT2 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms