Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm44121-201ENSMUST00000205169 2006 ntBASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp40Q8BWR4 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm13821-201ENSMUST00000202029 3201 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm13176-201ENSMUST00000117910 477 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm15311-201ENSMUST00000119682 282 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm13059-201ENSMUST00000119881 398 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm15305-201ENSMUST00000120354 288 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm11472-201ENSMUST00000121305 556 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm12372-201ENSMUST00000121654 768 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Mir6989-201ENSMUST00000184812 65 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm45276-201ENSMUST00000209549 1086 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 AC150661.1-201ENSMUST00000222563 495 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Pramel-201ENSMUST00000118979 1383 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm44021-201ENSMUST00000203055 3516 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Gm42577-201ENSMUST00000201367 3211 ntBASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp40Q8BWR4 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm23979-201ENSMUST00000104071 128 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm16420-201ENSMUST00000120258 856 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm12001-201ENSMUST00000121727 913 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm22223-201ENSMUST00000157360 125 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm26570-201ENSMUST00000180672 342 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm17895-201ENSMUST00000194028 874 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm19088-201ENSMUST00000198800 566 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm43459-201ENSMUST00000202093 331 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 AC130831.1-201ENSMUST00000224546 1474 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.57□□□□□ -0.88
Usp40Q8BWR4 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp40Q8BWR4 Gm14615-201ENSMUST00000117575 1816 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms