Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm4613-201ENSMUST00000165488 276 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm21430-201ENSMUST00000182998 998 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm19116-201ENSMUST00000218592 642 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 AV026068-229ENSMUST00000225516 595 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm2840-201ENSMUST00000048361 411 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.33□□□□□ -1.24
Ccdc40Q8BI79 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm25505-201ENSMUST00000157220 246 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm8921-201ENSMUST00000204306 649 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm43905-201ENSMUST00000204516 204 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm44943-201ENSMUST00000207254 300 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm44982-201ENSMUST00000208795 471 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm6054-201ENSMUST00000078052 378 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc40Q8BI79 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm38128-201ENSMUST00000192085 3250 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm7129-201ENSMUST00000117402 997 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm11893-201ENSMUST00000117829 491 ntBASIC7.31□□□□□ -1.24
Ccdc40Q8BI79 Gm13878-201ENSMUST00000117986 577 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms