Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm15103-201ENSMUST00000119893 871 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm16027-201ENSMUST00000161618 758 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm24300-201ENSMUST00000177809 109 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm24017-201ENSMUST00000178726 109 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm23952-201ENSMUST00000179380 109 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm29355-201ENSMUST00000188178 697 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm28953-201ENSMUST00000188336 697 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm20788-201ENSMUST00000190538 697 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm37395-201ENSMUST00000194721 697 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Trdv3-201ENSMUST00000198551 309 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm43243-201ENSMUST00000199964 278 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm43203-201ENSMUST00000200130 558 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm45506-201ENSMUST00000211620 280 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.96□□□□□ -1.3
Usp39Q3TIX9 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Usp39Q3TIX9 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm14957-201ENSMUST00000121069 817 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm25178-201ENSMUST00000122633 325 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm22342-201ENSMUST00000122647 298 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm15279-201ENSMUST00000155593 288 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm23762-201ENSMUST00000158348 106 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm19840-201ENSMUST00000169624 882 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm8046-201ENSMUST00000172151 616 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm21182-201ENSMUST00000178899 794 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm37322-201ENSMUST00000193409 337 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm37349-201ENSMUST00000194205 624 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm43226-201ENSMUST00000202438 259 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm4605-201ENSMUST00000203148 625 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm43867-201ENSMUST00000203860 525 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm2767-201ENSMUST00000209582 473 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp39Q3TIX9 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 Gm18043-201ENSMUST00000216741 739 ntBASIC6.95□□□□□ -1.3
Usp39Q3TIX9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms