Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm16074-201ENSMUST00000119524 444 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm25271-201ENSMUST00000157273 290 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm17198-201ENSMUST00000171792 1154 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm8895-201ENSMUST00000172300 1223 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm23011-202ENSMUST00000197855 275 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Mir5121-201ENSMUST00000198528 74 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm45608-201ENSMUST00000210948 389 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PrkdcP97313 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC4.57□□□□□ -1.68
PrkdcP97313 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PrkdcP97313 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PrkdcP97313 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm25374-201ENSMUST00000158158 101 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC4.57□□□□□ -1.68
PrkdcP97313 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.57□□□□□ -1.68
PrkdcP97313 Gm37920-201ENSMUST00000192952 749 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 Gm5853-201ENSMUST00000197183 632 ntBASIC4.57□□□□□ -1.68
PrkdcP97313 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PrkdcP97313 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PrkdcP97313 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PrkdcP97313 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 AC151904.1-201ENSMUST00000219945 1498 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 AC130219.1-201ENSMUST00000228406 3433 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm26078-201ENSMUST00000104067 128 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm16423-201ENSMUST00000120078 947 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm11787-201ENSMUST00000121996 1050 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm23669-201ENSMUST00000157470 128 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm23408-201ENSMUST00000158523 265 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm37477-201ENSMUST00000195215 884 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm2996-201ENSMUST00000211398 537 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm9292-201ENSMUST00000222008 710 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm25587-201ENSMUST00000082498 166 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Gm26130-201ENSMUST00000083171 138 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PrkdcP97313 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm15621-201ENSMUST00000119162 364 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PrkdcP97313 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Mir143-201ENSMUST00000083511 63 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 AC158986.1-201ENSMUST00000228391 3455 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC4.56□□□□□ -1.68
PrkdcP97313 Gm37142-201ENSMUST00000193718 3110 ntBASIC4.56□□□□□ -1.68
PrkdcP97313 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms