Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm13469-201ENSMUST00000118231 350 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm11320-201ENSMUST00000119434 463 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm11850-201ENSMUST00000119679 479 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm12654-201ENSMUST00000120387 587 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm15220-201ENSMUST00000120730 379 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm11933-201ENSMUST00000121550 375 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm16248-201ENSMUST00000124238 243 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm5272-201ENSMUST00000182730 982 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ufd1P70362 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
Ufd1P70362 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm19228-201ENSMUST00000214030 717 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.87□□□□□ -1.47
Ufd1P70362 Zfp389-202ENSMUST00000224437 1234 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm6807-201ENSMUST00000077435 888 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm17541-201ENSMUST00000080062 525 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 CT025639.1-201ENSMUST00000223906 1375 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ufd1P70362 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Ufd1P70362 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.87□□□□□ -1.47
Ufd1P70362 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ufd1P70362 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ufd1P70362 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ufd1P70362 AC125487.1-201ENSMUST00000217888 1300 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm15481-201ENSMUST00000120264 539 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm21430-201ENSMUST00000182998 998 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm29197-201ENSMUST00000185922 702 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC5.86□□□□□ -1.47
Ufd1P70362 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ufd1P70362 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm43108-201ENSMUST00000200525 293 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm44380-201ENSMUST00000203125 293 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm43905-201ENSMUST00000204516 204 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm45481-201ENSMUST00000209717 877 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm34424-201ENSMUST00000213400 782 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 AC092710.1-201ENSMUST00000221005 192 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 AC123867.1-201ENSMUST00000224990 816 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm6887-201ENSMUST00000080945 482 ntBASIC5.86□□□□□ -1.47
Ufd1P70362 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Ufd1P70362 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ufd1P70362 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms