Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.65□□□□□ -1.51
Lmo4P61969 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC5.65□□□□□ -1.51
Lmo4P61969 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
Lmo4P61969 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
Lmo4P61969 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lmo4P61969 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lmo4P61969 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.65□□□□□ -1.51
Lmo4P61969 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lmo4P61969 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Lmo4P61969 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 CT571245.1-201ENSMUST00000218642 3465 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm13301-201ENSMUST00000121728 2446 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm24473-201ENSMUST00000104483 131 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm14893-201ENSMUST00000117904 282 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm17217-201ENSMUST00000166613 469 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm18808-201ENSMUST00000173316 462 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm21877-201ENSMUST00000185640 694 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm28846-201ENSMUST00000189161 368 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm28413-201ENSMUST00000189369 291 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm9504-201ENSMUST00000196322 468 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm44374-201ENSMUST00000199821 140 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm46231-201ENSMUST00000220152 314 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm24621-201ENSMUST00000082679 140 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Mir425-201ENSMUST00000083645 85 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Lmo4P61969 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.64□□□□□ -1.51
Lmo4P61969 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.64□□□□□ -1.51
Lmo4P61969 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lmo4P61969 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Lmo4P61969 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lmo4P61969 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 AC159264.1-201ENSMUST00000224844 4257 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm37745-201ENSMUST00000193304 8163 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm15311-201ENSMUST00000119682 282 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm4992-201ENSMUST00000120256 768 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm15305-201ENSMUST00000120354 288 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm13462-201ENSMUST00000121472 961 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm22223-201ENSMUST00000157360 125 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm3344-201ENSMUST00000169610 603 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm20454-201ENSMUST00000172713 221 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm26570-201ENSMUST00000180672 342 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm21392-201ENSMUST00000182950 972 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Mir6921-201ENSMUST00000183719 80 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm37191-201ENSMUST00000193346 388 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm37319-201ENSMUST00000193500 636 ntBASIC5.63□□□□□ -1.51
Lmo4P61969 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.63□□□□□ -1.51
Lmo4P61969 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lmo4P61969 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms