Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm43235-201ENSMUST00000200121 297 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.87□□□□□ -0.99
Msh6P54276 Mir425-201ENSMUST00000083645 85 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Msh6P54276 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Msh6P54276 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Msh6P54276 AC165260.6-206ENSMUST00000223884 3698 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Msh6P54276 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.87□□□□□ -0.99
Msh6P54276 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
Msh6P54276 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Msh6P54276 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Msh6P54276 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.86□□□□□ -0.99
Msh6P54276 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Msh6P54276 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm16248-201ENSMUST00000124238 243 ntBASIC8.86□□□□□ -0.99
Msh6P54276 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm23740-201ENSMUST00000157385 100 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm24435-201ENSMUST00000157886 110 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm22518-201ENSMUST00000158267 68 ntBASIC8.86□□□□□ -0.99
Msh6P54276 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8.86□□□□□ -0.99
Msh6P54276 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm42673-201ENSMUST00000202676 337 ntBASIC8.86□□□□□ -0.99
Msh6P54276 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.86□□□□□ -0.99
Msh6P54276 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm8607-201ENSMUST00000221864 431 ntBASIC8.86□□□□□ -0.99
Msh6P54276 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.86□□□□□ -0.99
Msh6P54276 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Msh6P54276 Cma2-202ENSMUST00000228263 857 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Msh6P54276 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm15311-201ENSMUST00000119682 282 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm15305-201ENSMUST00000120354 288 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Gm21301-201ENSMUST00000189476 699 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm37901-201ENSMUST00000195107 514 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm6077-201ENSMUST00000196008 499 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Gm29784-201ENSMUST00000196217 406 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.86□□□□□ -0.99
Msh6P54276 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Msh6P54276 AC114572.1-201ENSMUST00000227262 300 ntBASIC8.86□□□□□ -0.99
Msh6P54276 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Msh6P54276 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Msh6P54276 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Msh6P54276 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms