Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 AC117797.1-201ENSMUST00000223977 695 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 CT025525.2-201ENSMUST00000227743 423 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm9800-201ENSMUST00000052615 336 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Shmt1P50431 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Shmt1P50431 Snora21-201ENSMUST00000082967 137 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Shmt1P50431 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Shmt1P50431 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC7.5□□□□□ -1.21
Shmt1P50431 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.5□□□□□ -1.21
Shmt1P50431 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.5□□□□□ -1.21
Shmt1P50431 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Shmt1P50431 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm22774-201ENSMUST00000102084 109 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm14579-201ENSMUST00000117068 283 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Gm15316-201ENSMUST00000121082 421 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Gm15530-201ENSMUST00000122206 555 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm6264-201ENSMUST00000160802 624 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm24157-201ENSMUST00000175265 111 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.49□□□□□ -1.21
Shmt1P50431 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC7.49□□□□□ -1.21
Shmt1P50431 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm21054-201ENSMUST00000203981 380 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.49□□□□□ -1.21
Shmt1P50431 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Shmt1P50431 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 AC154461.6-201ENSMUST00000224815 2630 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm14466-201ENSMUST00000119028 451 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm12174-201ENSMUST00000119853 813 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm13460-201ENSMUST00000121274 353 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm16138-201ENSMUST00000159341 821 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Shmt1P50431 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Shmt1P50431 Gm37328-201ENSMUST00000193191 640 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm37002-201ENSMUST00000194560 373 ntBASIC7.48□□□□□ -1.21
Shmt1P50431 Gm37526-201ENSMUST00000194640 619 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms