Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Rfx1P48377 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Rfx1P48377 Gm22934-201ENSMUST00000103961 132 ntBASIC8.81□□□□□ -1
Rfx1P48377 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Rfx1P48377 Gm24195-201ENSMUST00000116804 137 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm15422-201ENSMUST00000117453 541 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm14480-201ENSMUST00000118521 433 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm8662-201ENSMUST00000118644 574 ntBASIC8.81□□□□□ -1
Rfx1P48377 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm8312-201ENSMUST00000119380 618 ntBASIC8.81□□□□□ -1
Rfx1P48377 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm11797-201ENSMUST00000121336 754 ntBASIC8.81□□□□□ -1
Rfx1P48377 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC8.81□□□□□ -1
Rfx1P48377 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC8.81□□□□□ -1
Rfx1P48377 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm28281-201ENSMUST00000185658 187 ntBASIC8.81□□□□□ -1
Rfx1P48377 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC8.81□□□□□ -1
Rfx1P48377 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm7565-201ENSMUST00000203611 623 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.81□□□□□ -1
Rfx1P48377 Gm9689-201ENSMUST00000210009 428 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.81□□□□□ -1
Rfx1P48377 Gm33778-201ENSMUST00000216884 704 ntBASIC8.81□□□□□ -1
Rfx1P48377 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.81□□□□□ -1
Rfx1P48377 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.81□□□□□ -1
Rfx1P48377 AC137871.3-201ENSMUST00000226628 225 ntBASIC8.81□□□□□ -1
Rfx1P48377 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm5590-201ENSMUST00000059110 345 ntBASIC8.81□□□□□ -1
Rfx1P48377 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rfx1P48377 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rfx1P48377 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
Rfx1P48377 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.81□□□□□ -1
Rfx1P48377 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rfx1P48377 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.81□□□□□ -1
Rfx1P48377 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rfx1P48377 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Rfx1P48377 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rfx1P48377 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Rfx1P48377 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.8□□□□□ -1
Rfx1P48377 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rfx1P48377 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm14414-201ENSMUST00000120833 573 ntBASIC8.8□□□□□ -1
Rfx1P48377 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.8□□□□□ -1
Rfx1P48377 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.8□□□□□ -1
Rfx1P48377 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.8□□□□□ -1
Rfx1P48377 Gm17835-201ENSMUST00000196870 499 ntBASIC8.8□□□□□ -1
Rfx1P48377 Gm44471-201ENSMUST00000197963 100 ntBASIC8.8□□□□□ -1
Rfx1P48377 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm7424-201ENSMUST00000206919 902 ntBASIC8.8□□□□□ -1
Rfx1P48377 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Rfx1P48377 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rfx1P48377 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.8□□□□□ -1
Rfx1P48377 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.8□□□□□ -1
Rfx1P48377 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC8.8□□□□□ -1
Rfx1P48377 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.8□□□□□ -1
Rfx1P48377 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rfx1P48377 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm23448-201ENSMUST00000083151 104 ntBASIC8.8□□□□□ -1
Rfx1P48377 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Rfx1P48377 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm7648-201ENSMUST00000173036 1658 ntBASIC8.8□□□□□ -1
Rfx1P48377 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.8□□□□□ -1
Rfx1P48377 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.8□□□□□ -1
Rfx1P48377 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rfx1P48377 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm37124-201ENSMUST00000192140 1992 ntBASIC8.79□□□□□ -1
Rfx1P48377 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.79□□□□□ -1
Rfx1P48377 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.79□□□□□ -1
Rfx1P48377 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rfx1P48377 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Rfx1P48377 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rfx1P48377 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rfx1P48377 Gm13458-201ENSMUST00000118239 367 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms