Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.68□□□□□ -1.5
VhlP40338 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VhlP40338 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.68□□□□□ -1.5
VhlP40338 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VhlP40338 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VhlP40338 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.68□□□□□ -1.5
VhlP40338 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.68□□□□□ -1.5
VhlP40338 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VhlP40338 Robo2-210ENSMUST00000226478 8059 ntBASIC5.68□□□□□ -1.5
VhlP40338 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.68□□□□□ -1.5
VhlP40338 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.68□□□□□ -1.5
VhlP40338 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.68□□□□□ -1.5
VhlP40338 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VhlP40338 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
VhlP40338 Gm42874-201ENSMUST00000198888 1774 ntBASIC5.67□□□□□ -1.5
VhlP40338 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VhlP40338 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 Mir708-201ENSMUST00000102189 109 ntBASIC5.67□□□□□ -1.5
VhlP40338 Mir697-201ENSMUST00000102316 109 ntBASIC5.67□□□□□ -1.5
VhlP40338 Mir763-201ENSMUST00000103249 120 ntBASIC5.67□□□□□ -1.5
VhlP40338 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VhlP40338 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VhlP40338 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VhlP40338 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm6491-201ENSMUST00000118273 990 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm15665-201ENSMUST00000119116 847 ntBASIC5.67□□□□□ -1.5
VhlP40338 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm15049-201ENSMUST00000120474 463 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm11954-201ENSMUST00000121403 349 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm5656-201ENSMUST00000171020 1096 ntBASIC5.67□□□□□ -1.5
VhlP40338 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VhlP40338 Gm26570-201ENSMUST00000180672 342 ntBASIC5.67□□□□□ -1.5
VhlP40338 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm6197-201ENSMUST00000192273 454 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.67□□□□□ -1.5
VhlP40338 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm18131-201ENSMUST00000199241 449 ntBASIC5.67□□□□□ -1.5
VhlP40338 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VhlP40338 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC5.67□□□□□ -1.5
VhlP40338 Gm9801-201ENSMUST00000054860 408 ntBASIC5.67□□□□□ -1.5
VhlP40338 Olfr683-201ENSMUST00000061284 960 ntBASIC5.67□□□□□ -1.5
VhlP40338 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm6887-201ENSMUST00000080945 482 ntBASIC5.67□□□□□ -1.5
VhlP40338 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm37410-201ENSMUST00000193623 3039 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.67□□□□□ -1.5
VhlP40338 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VhlP40338 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm18830-201ENSMUST00000199036 1396 ntBASIC5.67□□□□□ -1.5
VhlP40338 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.67□□□□□ -1.5
VhlP40338 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VhlP40338 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VhlP40338 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
VhlP40338 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
VhlP40338 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VhlP40338 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VhlP40338 Gm38697-201ENSMUST00000198061 1746 ntBASIC5.66□□□□□ -1.5
VhlP40338 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VhlP40338 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
VhlP40338 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VhlP40338 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC5.66□□□□□ -1.5
VhlP40338 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms