Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.19□□□□□ -1.1
Traf1P39428 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.19□□□□□ -1.1
Traf1P39428 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.19□□□□□ -1.1
Traf1P39428 AC154640.3-201ENSMUST00000227492 846 ntBASIC8.19□□□□□ -1.1
Traf1P39428 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Traf1P39428 Gm24924-201ENSMUST00000084007 164 ntBASIC8.19□□□□□ -1.1
Traf1P39428 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.19□□□□□ -1.1
Traf1P39428 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Traf1P39428 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.19□□□□□ -1.1
Traf1P39428 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Traf1P39428 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Traf1P39428 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm42994-201ENSMUST00000195964 2549 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm14202-201ENSMUST00000120121 311 ntBASIC8.18□□□□□ -1.1
Traf1P39428 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Gm24756-201ENSMUST00000177002 96 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm9114-201ENSMUST00000188558 997 ntBASIC8.18□□□□□ -1.1
Traf1P39428 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm2767-201ENSMUST00000209582 473 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Gm2840-201ENSMUST00000048361 411 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm5528-201ENSMUST00000076314 480 ntBASIC8.18□□□□□ -1.1
Traf1P39428 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Gm24451-201ENSMUST00000083353 133 ntBASIC8.18□□□□□ -1.1
Traf1P39428 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 AC154576.1-202ENSMUST00000223966 3320 ntBASIC8.18□□□□□ -1.1
Traf1P39428 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Traf1P39428 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Traf1P39428 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Traf1P39428 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm11893-201ENSMUST00000117829 491 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm14729-201ENSMUST00000118373 689 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm23888-201ENSMUST00000122690 253 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.17□□□□□ -1.1
Traf1P39428 Gm24369-201ENSMUST00000175387 96 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm25617-201ENSMUST00000179548 133 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Mir7033-201ENSMUST00000184259 81 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29048-201ENSMUST00000185342 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29403-201ENSMUST00000185491 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28234-201ENSMUST00000185657 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28248-201ENSMUST00000186093 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29633-202ENSMUST00000186217 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28829-201ENSMUST00000186231 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28261-201ENSMUST00000186417 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28815-201ENSMUST00000186751 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28608-201ENSMUST00000186860 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28122-201ENSMUST00000187088 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28420-201ENSMUST00000187340 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28106-201ENSMUST00000187640 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm28698-201ENSMUST00000187734 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29224-201ENSMUST00000187965 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29189-201ENSMUST00000188018 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29476-201ENSMUST00000188397 615 ntBASIC8.17□□□□□ -1.1
Traf1P39428 Gm29505-201ENSMUST00000188424 615 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms