Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxc11P31313 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.94□□□□□ -1.3
Hoxc11P31313 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm14891-201ENSMUST00000117378 596 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm15421-202ENSMUST00000118224 399 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm14787-201ENSMUST00000121236 388 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm13282-201ENSMUST00000121577 545 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm16357-201ENSMUST00000144091 474 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Mir6908-201ENSMUST00000184056 63 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Mir6357-201ENSMUST00000184246 104 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm8004-201ENSMUST00000187782 617 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm5066-201ENSMUST00000188479 822 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm28070-201ENSMUST00000191502 445 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm43396-201ENSMUST00000197506 706 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm34272-201ENSMUST00000208886 253 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm2767-201ENSMUST00000209582 473 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxc11P31313 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.93□□□□□ -1.3
Hoxc11P31313 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxc11P31313 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.92□□□□□ -1.3
Hoxc11P31313 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Hoxc11P31313 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.92□□□□□ -1.3
Hoxc11P31313 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Hoxc11P31313 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Hoxc11P31313 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxc11P31313 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Hoxc11P31313 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.92□□□□□ -1.3
Hoxc11P31313 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxc11P31313 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms