Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm25505-201ENSMUST00000157220 246 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm22687-201ENSMUST00000158301 105 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nedd8P29595 Mir3100-201ENSMUST00000174918 65 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm4956-202ENSMUST00000178869 672 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm27403-201ENSMUST00000184662 214 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC6.18□□□□□ -1.42
Nedd8P29595 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm8925-201ENSMUST00000197212 763 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm43656-201ENSMUST00000197882 434 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC6.18□□□□□ -1.42
Nedd8P29595 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm45478-201ENSMUST00000209472 211 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nedd8P29595 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.18□□□□□ -1.42
Nedd8P29595 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Nedd8P29595 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nedd8P29595 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
Nedd8P29595 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nedd8P29595 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.18□□□□□ -1.42
Nedd8P29595 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Nedd8P29595 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nedd8P29595 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Mir760-201ENSMUST00000103257 119 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm11810-201ENSMUST00000118311 333 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm5387-201ENSMUST00000119776 857 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm11257-201ENSMUST00000121313 315 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm12094-201ENSMUST00000121781 472 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm26408-201ENSMUST00000157672 127 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm16026-205ENSMUST00000162923 641 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.17□□□□□ -1.42
Nedd8P29595 Mir6973a-201ENSMUST00000183646 78 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm8182-201ENSMUST00000197863 769 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm44705-201ENSMUST00000206719 339 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm8952-201ENSMUST00000206828 1102 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nedd8P29595 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 AV026068-229ENSMUST00000225516 595 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm28392-201ENSMUST00000077630 393 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.17□□□□□ -1.42
Nedd8P29595 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nedd8P29595 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Nedd8P29595 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC6.16□□□□□ -1.42
Nedd8P29595 Gm45088-201ENSMUST00000207066 1408 ntBASIC6.16□□□□□ -1.42
Nedd8P29595 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Nedd8P29595 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms