Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 CT030170.6-202ENSMUST00000223186 544 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
Sdc1P18828 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.56□□□□□ -1.52
Sdc1P18828 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sdc1P18828 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.56□□□□□ -1.52
Sdc1P18828 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sdc1P18828 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sdc1P18828 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Sdc1P18828 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm22022-201ENSMUST00000104355 127 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm23840-201ENSMUST00000116950 97 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm14659-201ENSMUST00000117667 843 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm7831-201ENSMUST00000117990 552 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm12601-201ENSMUST00000118994 846 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm13915-201ENSMUST00000119314 931 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm8813-201ENSMUST00000155930 595 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm22388-201ENSMUST00000158194 248 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm17217-201ENSMUST00000166613 469 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm25190-201ENSMUST00000176664 95 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC5.55□□□□□ -1.52
Sdc1P18828 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm36448-201ENSMUST00000199916 438 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm18765-201ENSMUST00000203166 660 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm45343-201ENSMUST00000210452 828 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm45506-201ENSMUST00000211620 280 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 AC120002.1-201ENSMUST00000218456 331 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm5194-201ENSMUST00000221457 742 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 AC129975.2-201ENSMUST00000223705 775 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 AC207128.1-201ENSMUST00000225928 799 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm28392-201ENSMUST00000077630 393 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm25926-201ENSMUST00000082899 160 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm5361-201ENSMUST00000211041 1498 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Sdc1P18828 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.55□□□□□ -1.52
Sdc1P18828 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sdc1P18828 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms