Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Lire1P11260 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.9□□□□□ -1.3
Lire1P11260 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.9□□□□□ -1.3
Lire1P11260 n-R5s1-201ENSMUST00000101925 119 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Lire1P11260 Gm25916-201ENSMUST00000104263 131 ntBASIC6.9□□□□□ -1.3
Lire1P11260 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Lire1P11260 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Lire1P11260 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm13526-201ENSMUST00000117970 189 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm13463-201ENSMUST00000119020 233 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm15153-201ENSMUST00000119867 274 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm12632-201ENSMUST00000121223 495 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Lire1P11260 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.9□□□□□ -1.3
Lire1P11260 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm24236-201ENSMUST00000157794 134 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm5973-201ENSMUST00000178542 496 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm44319-201ENSMUST00000196974 93 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.9□□□□□ -1.3
Lire1P11260 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.9□□□□□ -1.3
Lire1P11260 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.9□□□□□ -1.3
Lire1P11260 Gm45157-201ENSMUST00000208729 401 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Gm17995-201ENSMUST00000209266 530 ntBASIC6.9□□□□□ -1.3
Lire1P11260 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.9□□□□□ -1.3
Lire1P11260 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.9□□□□□ -1.3
Lire1P11260 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.9□□□□□ -1.3
Lire1P11260 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Lire1P11260 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Lire1P11260 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.9□□□□□ -1.31
Lire1P11260 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Lire1P11260 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Lire1P11260 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lire1P11260 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.9□□□□□ -1.31
Lire1P11260 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Lire1P11260 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.9□□□□□ -1.31
Lire1P11260 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
Lire1P11260 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.9□□□□□ -1.31
Lire1P11260 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.9□□□□□ -1.31
Lire1P11260 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Lire1P11260 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Lire1P11260 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Lire1P11260 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm13214-201ENSMUST00000122137 408 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm23762-201ENSMUST00000158348 106 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm26238-201ENSMUST00000175538 117 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Lire1P11260 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm7560-201ENSMUST00000187748 873 ntBASIC6.89□□□□□ -1.31
Lire1P11260 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Gm43471-201ENSMUST00000197550 467 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC6.89□□□□□ -1.31
Lire1P11260 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Lire1P11260 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.89□□□□□ -1.31
Lire1P11260 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Lire1P11260 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Lire1P11260 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Lire1P11260 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Lire1P11260 Mir135b-201ENSMUST00000083501 97 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Gm22865-201ENSMUST00000083949 214 ntBASIC6.89□□□□□ -1.31
Lire1P11260 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms