Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm8836-201ENSMUST00000198196 1348 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm24462-201ENSMUST00000102430 106 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm24139-201ENSMUST00000122780 288 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm22811-201ENSMUST00000157468 154 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm23031-201ENSMUST00000157998 119 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm24576-201ENSMUST00000175508 248 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm20111-201ENSMUST00000184830 319 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm28645-201ENSMUST00000185859 564 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm32102-201ENSMUST00000196885 241 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Gm18243-201ENSMUST00000220756 887 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.59□□□□□ -1.51
Hmgb3O54879 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hmgb3O54879 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hmgb3O54879 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Hmgb3O54879 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Hmgb3O54879 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hmgb3O54879 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.59□□□□□ -1.52
Hmgb3O54879 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC5.59□□□□□ -1.52
Hmgb3O54879 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm6679-201ENSMUST00000191467 1869 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm10555-201ENSMUST00000193178 1791 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm23323-201ENSMUST00000104471 133 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm12445-201ENSMUST00000117947 885 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm11987-201ENSMUST00000118524 381 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm23094-201ENSMUST00000157551 322 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm26323-201ENSMUST00000157743 175 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm22882-201ENSMUST00000157749 124 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm26980-201ENSMUST00000183321 395 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm29197-201ENSMUST00000185922 702 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm28728-201ENSMUST00000189087 405 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm37392-201ENSMUST00000192098 516 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC5.58□□□□□ -1.52
Hmgb3O54879 AC163638.1-201ENSMUST00000224818 392 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 AC137950.1-201ENSMUST00000228553 515 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hmgb3O54879 Olfr888-201ENSMUST00000075228 945 ntBASIC5.58□□□□□ -1.52
Hmgb3O54879 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hmgb3O54879 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms