Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm27972-201ENSMUST00000184720 137 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 BC049739-201ENSMUST00000202626 660 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 AC159264.1-202ENSMUST00000224856 3162 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Prkaa1-202ENSMUST00000228218 4618 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Gm12244-201ENSMUST00000119500 291 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Mir6348-201ENSMUST00000183804 120 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 AC134917.2-201ENSMUST00000223354 124 ntBASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc180J3QNE4 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm15621-201ENSMUST00000119162 364 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm26169-201ENSMUST00000158420 135 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm28023-201ENSMUST00000184556 60 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm27825-201ENSMUST00000184586 60 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm44162-201ENSMUST00000203543 544 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm44705-201ENSMUST00000206719 339 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 AC154834.1-201ENSMUST00000224697 358 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm45767-201ENSMUST00000212778 4561 ntBASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc180J3QNE4 Gm43789-201ENSMUST00000199275 2472 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm11462-201ENSMUST00000117749 562 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm23386-201ENSMUST00000158585 144 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm17137-202ENSMUST00000165729 957 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Mir7072-201ENSMUST00000184542 60 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm43392-201ENSMUST00000196560 434 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc180J3QNE4 Gm25587-201ENSMUST00000082498 166 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms