Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm4640-201ENSMUST00000203927 2352 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Gm42585-201ENSMUST00000198731 4020 ntBASIC1.69□□□□□ -2.14
Gm4559A4IF42 Cd4-201ENSMUST00000024044 3108 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Gm4559A4IF42 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Asic2-202ENSMUST00000066197 2700 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Melk-201ENSMUST00000045607 2955 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Hivep3-201ENSMUST00000084306 2973 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 AC149588.1-201ENSMUST00000228274 3745 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 C330002G04Rik-201ENSMUST00000181623 2054 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm5989-201ENSMUST00000096092 2077 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm37912-201ENSMUST00000191895 3076 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm42785-201ENSMUST00000202316 3835 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm10287-202ENSMUST00000180599 4059 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm6210-201ENSMUST00000204734 1942 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Gm44848-201ENSMUST00000207808 3234 ntBASIC1.68□□□□□ -2.14
Gm4559A4IF42 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Gm4559A4IF42 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms