Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Upk3aQ9JKX8 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm7910-201ENSMUST00000117896 835 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm11858-201ENSMUST00000117935 838 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm13735-201ENSMUST00000120217 670 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm14070-201ENSMUST00000120773 428 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm11581-201ENSMUST00000122024 763 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm26025-201ENSMUST00000158655 271 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm22533-201ENSMUST00000158821 274 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm27360-201ENSMUST00000183487 80 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm27866-201ENSMUST00000184459 171 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upk3aQ9JKX8 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm12535-201ENSMUST00000121025 484 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm7599-201ENSMUST00000121453 796 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm15096-201ENSMUST00000121918 878 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Gm24369-201ENSMUST00000175387 96 ntBASIC6.66□□□□□ -1.34
Upk3aQ9JKX8 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms