Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9800-201ENSMUST00000052615 336 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm10108-201ENSMUST00000078246 319 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm23054-201ENSMUST00000082804 162 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cdc40Q9DC48 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Cdc40Q9DC48 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm15203-201ENSMUST00000117668 455 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm13900-201ENSMUST00000119402 498 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm15538-201ENSMUST00000121410 313 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm14990-201ENSMUST00000122354 445 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm2735-201ENSMUST00000136133 277 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm2709-201ENSMUST00000142979 350 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm6264-201ENSMUST00000160802 624 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm22642-201ENSMUST00000175352 252 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm27018-201ENSMUST00000181136 225 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm2840-201ENSMUST00000048361 411 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm22865-201ENSMUST00000083949 214 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.52□□□□□ -1.37
Cdc40Q9DC48 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm22707-201ENSMUST00000103834 110 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Gm26416-201ENSMUST00000104280 134 ntBASIC6.51□□□□□ -1.37
Cdc40Q9DC48 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms