Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ubqln4Q99NB8 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.33□□□□□ -1.4
Ubqln4Q99NB8 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Ubqln4Q99NB8 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ubqln4Q99NB8 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.33□□□□□ -1.4
Ubqln4Q99NB8 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm25311-201ENSMUST00000104136 132 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm15105-201ENSMUST00000117777 204 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm13798-201ENSMUST00000118285 139 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm23276-201ENSMUST00000157913 138 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm23945-201ENSMUST00000179609 92 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm26570-201ENSMUST00000180672 342 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm18848-201ENSMUST00000182069 792 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm27026-201ENSMUST00000183003 892 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm42673-201ENSMUST00000202676 337 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm44111-201ENSMUST00000204649 399 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm26130-201ENSMUST00000083171 138 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm22053-201ENSMUST00000083394 200 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ubqln4Q99NB8 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm25631-201ENSMUST00000104390 130 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm15158-201ENSMUST00000120577 570 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm7651-201ENSMUST00000173398 901 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm28958-201ENSMUST00000185864 703 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm42804-201ENSMUST00000199701 178 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubqln4Q99NB8 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms