Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14375-201ENSMUST00000119490 855 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm11746-201ENSMUST00000119843 821 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm9435-201ENSMUST00000120379 877 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Adgrg4-206ENSMUST00000168724 531 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm20452-201ENSMUST00000174686 513 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm37770-201ENSMUST00000192855 772 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm43287-201ENSMUST00000197747 600 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.17□□□□□ -1.1
Clp1Q99LI9 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Clp1Q99LI9 Gm38352-201ENSMUST00000194459 2557 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm15578-201ENSMUST00000117320 475 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm11371-201ENSMUST00000120294 385 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm14728-201ENSMUST00000122196 492 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm22895-201ENSMUST00000157508 308 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm26321-201ENSMUST00000157740 242 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm17377-201ENSMUST00000165184 207 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm23018-201ENSMUST00000177928 109 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm8604-201ENSMUST00000183150 965 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm29144-201ENSMUST00000189235 339 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm29238-201ENSMUST00000189709 695 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm28607-201ENSMUST00000190142 339 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm28121-201ENSMUST00000191420 339 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm43582-201ENSMUST00000196149 343 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm43219-201ENSMUST00000197972 1937 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm45100-201ENSMUST00000209153 391 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm17995-201ENSMUST00000209266 530 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm45322-201ENSMUST00000211642 1361 ntBASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Clp1Q99LI9 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
Clp1Q99LI9 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms