Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.28□□□□□ -1.24
CopaQ8CIE6 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.28□□□□□ -1.24
CopaQ8CIE6 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CopaQ8CIE6 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.24
CopaQ8CIE6 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CopaQ8CIE6 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CopaQ8CIE6 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
CopaQ8CIE6 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CopaQ8CIE6 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CopaQ8CIE6 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm23437-201ENSMUST00000104036 127 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm15105-201ENSMUST00000117777 204 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm12593-201ENSMUST00000120981 743 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm7599-201ENSMUST00000121453 796 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm24011-201ENSMUST00000157732 268 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm7420-201ENSMUST00000162836 842 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm24300-201ENSMUST00000177809 109 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm24017-201ENSMUST00000178726 109 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm23952-201ENSMUST00000179380 109 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm23139-201ENSMUST00000179454 132 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm5787-201ENSMUST00000183049 1038 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm27684-201ENSMUST00000183778 80 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm42782-201ENSMUST00000197286 522 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm44192-201ENSMUST00000204195 556 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm18690-201ENSMUST00000204488 985 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm45100-201ENSMUST00000209153 391 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm45725-201ENSMUST00000212962 337 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.27□□□□□ -1.25
CopaQ8CIE6 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm13768-201ENSMUST00000116469 929 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm13735-201ENSMUST00000120217 670 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm23762-201ENSMUST00000158348 106 ntBASIC7.26□□□□□ -1.25
CopaQ8CIE6 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
CopaQ8CIE6 Gm21839-201ENSMUST00000179536 378 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 373.8 ms