Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm17170-201ENSMUST00000112785 316 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm15007-201ENSMUST00000119982 710 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm12903-201ENSMUST00000121015 544 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm16357-201ENSMUST00000144091 474 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm16027-201ENSMUST00000161618 758 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm17786-201ENSMUST00000182000 427 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm42883-201ENSMUST00000202594 222 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm8168-201ENSMUST00000209631 948 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Vps53Q8CCB4 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm8662-201ENSMUST00000118644 574 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm13545-201ENSMUST00000119044 482 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm15171-201ENSMUST00000122191 334 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm8089-201ENSMUST00000122463 968 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm26353-201ENSMUST00000158224 255 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm24680-201ENSMUST00000158759 126 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm22533-201ENSMUST00000158821 274 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm18699-201ENSMUST00000190713 243 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm38373-201ENSMUST00000192042 288 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm7341-201ENSMUST00000192183 926 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Vps53Q8CCB4 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms