Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm22256-201ENSMUST00000102291 107 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm15158-201ENSMUST00000120577 570 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm5166-201ENSMUST00000121332 573 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm14612-201ENSMUST00000121522 881 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Mir3060-201ENSMUST00000175339 83 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm21392-201ENSMUST00000182950 972 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm43141-201ENSMUST00000199695 274 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm44411-201ENSMUST00000204172 349 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.09□□□□□ -1.11
Alx1Q8C8B0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Alx1Q8C8B0 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Alx1Q8C8B0 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Alx1Q8C8B0 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.09□□□□□ -1.12
Alx1Q8C8B0 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm23810-201ENSMUST00000175150 74 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm43396-201ENSMUST00000197506 706 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm44705-201ENSMUST00000206719 339 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm5080-201ENSMUST00000220341 743 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm25587-201ENSMUST00000082498 166 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.08□□□□□ -1.12
Alx1Q8C8B0 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm2178-201ENSMUST00000104927 357 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Snord88a-201ENSMUST00000116723 90 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm25617-201ENSMUST00000179548 133 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm3841-201ENSMUST00000191399 451 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm25617-202ENSMUST00000198387 132 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm43089-201ENSMUST00000199162 275 ntBASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.07□□□□□ -1.12
Alx1Q8C8B0 Gm4042-201ENSMUST00000216946 637 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms