Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm12630-201ENSMUST00000121575 784 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm27512-201ENSMUST00000175328 126 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Igkv4-73-201ENSMUST00000199760 358 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm18009-201ENSMUST00000203239 1016 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm45122-201ENSMUST00000206376 784 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm44705-201ENSMUST00000206719 339 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm7499-201ENSMUST00000210423 813 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm17950-201ENSMUST00000214617 646 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 AC140930.1-201ENSMUST00000221889 389 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 AC161252.1-201ENSMUST00000225536 467 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm43880-201ENSMUST00000203635 2162 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.79□□□□□ -0.84
Usp54Q8BL06 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Usp54Q8BL06 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 AC129308.2-203ENSMUST00000224109 2385 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm7113-201ENSMUST00000120477 958 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Mir1960-201ENSMUST00000157488 78 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm24343-201ENSMUST00000158708 111 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm9064-201ENSMUST00000163579 566 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm22701-201ENSMUST00000175371 291 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm34768-201ENSMUST00000193884 565 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm5119-201ENSMUST00000215858 634 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm43496-201ENSMUST00000201682 3001 ntBASIC9.78□□□□□ -0.84
Usp54Q8BL06 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Usp54Q8BL06 Gm18879-201ENSMUST00000221187 1537 ntBASIC9.77□□□□□ -0.84
Usp54Q8BL06 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm12833-201ENSMUST00000136112 477 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm18447-201ENSMUST00000187501 307 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm38840-201ENSMUST00000204716 843 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Gm10221-201ENSMUST00000088299 309 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC9.77□□□□□ -0.85
Usp54Q8BL06 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usp54Q8BL06 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm15621-201ENSMUST00000119162 364 ntBASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm4997-201ENSMUST00000154056 360 ntBASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm27972-201ENSMUST00000184720 137 ntBASIC9.76□□□□□ -0.85
Usp54Q8BL06 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm2040-201ENSMUST00000202979 289 ntBASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm44809-201ENSMUST00000208305 993 ntBASIC9.76□□□□□ -0.85
Usp54Q8BL06 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms