Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm16056-201ENSMUST00000119293 135 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm11945-201ENSMUST00000120551 476 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm12459-201ENSMUST00000120659 356 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 n-R5s76-201ENSMUST00000122700 113 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm24530-201ENSMUST00000157948 288 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm24899-201ENSMUST00000158892 73 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm4246-201ENSMUST00000172822 216 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm29072-201ENSMUST00000191149 678 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm37295-201ENSMUST00000192186 109 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm17965-201ENSMUST00000193904 517 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm35108-201ENSMUST00000194321 699 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm37929-201ENSMUST00000195116 493 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm33191-201ENSMUST00000195604 699 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm9240-201ENSMUST00000206527 742 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm33778-201ENSMUST00000216884 704 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm19073-201ENSMUST00000219978 555 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 AC118230.1-201ENSMUST00000220196 656 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 AC192616.1-201ENSMUST00000221922 132 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm9761-201ENSMUST00000075650 492 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Klf5-202ENSMUST00000226784 2852 ntBASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
Scaf4Q6PFF0 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm5715-201ENSMUST00000196854 1465 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm24071-201ENSMUST00000104520 132 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm12387-201ENSMUST00000118573 955 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm13006-201ENSMUST00000118683 214 ntBASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC7.25□□□□□ -1.25
Scaf4Q6PFF0 Gm15753-201ENSMUST00000119241 1062 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms